S. cerevisiae strain S288C (Jun 2008) budding yeast (sacCer2) genome assembly

The files listed below are formatted for visualization in the Integrated Genome Browser, available from BioViz.org.

Annotation (bed) and alignment (psl) files (if available) were downloaded from the UCSC Genome Bioinformatics Table Browser. Each file is named for its corresponding table in the UCSC Genome database. See the annots.xml meta-data file in this directory for details.

Files with extension .gz were compressed and indexed using bgzip and tabix tools from htslib.org.

The file named S_cerevisiae_Jun_2008.2bit contains sequence data and is from the UCSC Genome Bioinformatics Web site. To convert a .2bit to fasta, use twoBitToFa. The file genome.txt lists sequences and their sizes and was made from S_cerevisiae_Jun_2008.2bit sequence file using twoBitInfo.

Both twoBitInfo and twoBitToFa are available from http://hgdownload.cse.ucsc.edu/admin/exe/.

	Name	Last modified	Size	Description
	Parent Directory		-
	S_cerevisiae_Jun_2008.2bit	2023-06-16 13:34	2.9M	Sequence data in blat 2bit format
	S_cerevisiae_Jun_2008_sdgGenes.bed.gz	2023-06-16 13:34	191K	Annotation or junction file
	S_cerevisiae_Jun_2008_sdgGenes.bed.gz.tbi	2023-06-16 13:34	2.6K	Tabix index file
	annots.xml	2023-06-16 13:34	368	Annotation and data file list
	genome.txt	2023-06-16 13:34	242	Chromosome lengths and assembly information