Ramazzottius varieornatus strain YOKOZUNA-1 (Nov 2016) genome assembly

The files listed below are formatted for visualization in the Integrated Genome Browser, available from BioViz.org.

The gene model annotation file R_varieornatus_YOKOZUNA-1_Nov_2016_ncbiGene.bed.gz was downloaded from the UCSC Genome Bioinformatics Table Browser (Table: hub_3041413_ncbiGene) and converted to BED-detail (bed14) format July 3, 2024.

The file named R_varieornatus_YOKOZUNA-1_Nov_2016.2bit contains sequence data. It was made from fasta file downloaded from NCBI. To convert it back to fasta, use twoBitToFa.

The file genome.txt lists sequences and their sizes and was made from the 2bit sequence file using twoBitInfo.

You can get twoBitInfo, twoBitToFa, faToTwoBit, and related programs from http://hgdownload.cse.ucsc.edu/admin/exe/.

	Name	Last modified	Size	Description
	Parent Directory		-
	R_varieornatus_YOKOZUNA-1_Nov_2016.2bit	2024-07-13 17:58	15M	Sequence data in blat 2bit format
	R_varieornatus_YOKOZUNA-1_Nov_2016_ncbiGene.bed.gz	2024-07-13 17:58	1.7M	Annotation or junction file
	R_varieornatus_YOKOZUNA-1_Nov_2016_ncbiGene.bed.gz.tbi	2024-07-13 17:58	14K	Tabix index file
	annots.xml	2024-07-13 17:58	510	Annotation and data file list
	genome.txt	2024-07-13 17:58	4.0K	Chromosome lengths and assembly information