Sample Samtools_mqc-generalstats-samtools-flagstat_total Samtools_mqc-generalstats-samtools-mapped_passed DupRadar_mqc-generalstats-dupradar-dupRadar_intercept RSeQC_mqc-generalstats-rseqc-proper_pairs_percent Samtools_mqc-generalstats-samtools-error_rate Samtools_mqc-generalstats-samtools-non_primary_alignments Samtools_mqc-generalstats-samtools-reads_mapped Samtools_mqc-generalstats-samtools-reads_mapped_percent Samtools_mqc-generalstats-samtools-reads_properly_paired_percent Samtools_mqc-generalstats-samtools-reads_MQ0_percent Samtools_mqc-generalstats-samtools-raw_total_sequences STAR_mqc-generalstats-star-uniquely_mapped_percent STAR_mqc-generalstats-star-uniquely_mapped Cutadapt_mqc-generalstats-cutadapt-percent_trimmed FastQC (trimmed)_mqc-generalstats-fastqc_trimmed-percent_duplicates FastQC (trimmed)_mqc-generalstats-fastqc_trimmed-percent_gc FastQC (trimmed)_mqc-generalstats-fastqc_trimmed-avg_sequence_length FastQC (trimmed)_mqc-generalstats-fastqc_trimmed-percent_fails FastQC (trimmed)_mqc-generalstats-fastqc_trimmed-total_sequences 7-OE3-15-min-28C 81477918 81477918 2.9007014654773e-12 87.99947735532466 0.00272072 5846101.0 75631817.0 100.0 99.98847707175936 0.10838031301033002 75631817.0 93.56 35858384.0 7-OE3-15-min-28C_1 2.052240895723611 88.69440754126295 41.0 147.36331752315428 18.181818181818183 38325520.0 7-OE3-15-min-28C_2 1.697976917657747 87.688401389152 40.0 147.14203483736162 18.181818181818183 38325520.0 7-OE3-15-min-34C 72980673 72980673 2.90070146547638e-12 87.47019364976258 0.002707677 5479296.0 67501377.0 100.0 99.99095870296098 0.08904410942609364 67501377.0 93.43 31923987.0 7-OE3-15-min-34C_1 1.784663737142992 89.00587497310275 41.0 147.41353621461275 18.181818181818183 34169080.0 7-OE3-15-min-34C_2 1.6370598007744475 87.52626842871847 40.0 147.19238788401677 18.181818181818183 34169080.0 7-OE3-30-min-28C 81057646 81057646 2.90070146547778e-12 87.55819777939271 0.002919862 5996120.0 75061526.0 100.0 99.98455133992347 0.09507267411536505 75061526.0 93.2 35497343.0 7-OE3-30-min-28C_1 1.5607798907168768 88.69202527442201 41.0 147.6029160994577 18.181818181818183 38088550.0 7-OE3-30-min-28C_2 1.477326035168094 87.43698829818207 40.0 147.380652610824 18.181818181818183 38088550.0 7-OE3-30-min-34C 74537524 74537524 2.90070146547841e-12 87.65938616367241 0.00293779 5517768.0 69019756.0 100.0 99.98631696119007 0.10717800856902479 69019756.0 93.3 32678587.0 7-OE3-30-min-34C_1 1.6560976993007352 88.7839171746103 41.0 147.616555288199 18.181818181818183 35023975.0 7-OE3-30-min-34C_2 1.502290260002315 87.06106370467151 40.0 147.3728874292538 18.181818181818183 35023975.0 7-OE3-45-min-28C 89267116 89267116 2.90070146547571e-12 87.62359926582594 0.002480902 6676685.0 82590431.0 100.0 99.98285394587661 0.12397441054642275 82590431.0 93.05 39123054.0 7-OE3-45-min-28C_1 1.3721470370698559 89.03680682670468 41.0 147.64542796517168 18.181818181818183 42043468.0 7-OE3-45-min-28C_2 1.3897451927268598 88.81210531471193 40.0 147.45883270143176 18.181818181818183 42043468.0 7-OE3-45-min-34C 79761304 79761304 2.90070146547613e-12 87.83195921671492 0.002491276 5844051.0 73917253.0 100.0 99.98822602349684 0.10533129525254409 73917253.0 93.6 35036235.0 7-OE3-45-min-34C_1 1.4657845202518216 88.6513026422522 41.0 147.5510217472002 18.181818181818183 37431715.0 7-OE3-45-min-34C_2 1.4710571826190355 88.36749213933382 40.0 147.35730371958644 18.181818181818183 37431715.0 7-OE3-75-min-28C 75092841 75092841 2.9007014654774e-12 88.09149729732559 0.002181764 5382553.0 69710288.0 100.0 99.99176592126545 0.09674468709697484 69710288.0 93.87 33080689.0 7-OE3-75-min-28C_1 1.7004833274751754 89.11577779659622 41.0 147.43628214420772 18.181818181818183 35239086.0 7-OE3-75-min-28C_2 1.552773118182766 89.05918560383122 40.0 147.2547001644708 18.181818181818183 35239086.0 7-OE3-75-min-34C 75074275 75074275 2.90070146547813e-12 87.59897847831364 0.002486722 5701500.0 69372775.0 100.0 99.98563557533917 0.15797407556494603 69372775.0 87.69 32891675.0 7-OE3-75-min-34C_1 1.8562869892610034 88.83872089318471 42.0 146.9456641712944 18.181818181818183 37510903.0 7-OE3-75-min-34C_2 1.883031484055259 88.59777646222769 41.0 146.75729064693536 18.181818181818183 37510903.0 7-VF36-15-min-28C 72962801 72962801 2.90070146547603e-12 87.62517217506493 0.002605163 5411678.0 67551123.0 100.0 99.98492845189266 0.12182476966371085 67551123.0 93.31 31976646.0 7-VF36-15-min-28C_1 1.8794805192192332 88.25465933425143 41.0 147.39193492268788 18.181818181818183 34268041.0 7-VF36-15-min-28C_2 1.616576311829147 88.19511430016556 40.0 147.18874207019888 18.181818181818183 34268041.0 7-VF36-15-min-34C 76358278 76358278 2.90070146547733e-12 87.47385843352832 0.002412781 5747937.0 70610341.0 100.0 99.9909630800395 0.11182498042319325 70610341.0 93.44 33402866.0 7-VF36-15-min-34C_1 1.3844807752375499 89.18830821588344 41.0 147.77100843985812 18.181818181818183 35746217.0 7-VF36-15-min-34C_2 1.348915266590163 88.69345712123577 40.0 147.5676583622821 18.181818181818183 35746217.0 7-VF36-30-min-28C 83335378 83335378 2.90070146547884e-12 87.8057791974016 0.002659078 6064833.0 77270545.0 100.0 99.98877580066247 0.11375227132149773 77270545.0 93.44 36594932.0 7-VF36-30-min-28C_1 1.5256090900944108 89.12512438352472 41.0 147.55634550650322 18.181818181818183 39165723.0 7-VF36-30-min-28C_2 1.4796472485581322 88.37310729593473 40.0 147.34670216607518 18.181818181818183 39165723.0 7-VF36-30-min-34C 72980195 72980195 2.90070146547808e-12 87.70276100248842 0.002673077 5360749.0 67619446.0 100.0 99.98615191257261 0.10423924502427898 67619446.0 93.35 32011768.0 7-VF36-30-min-34C_1 1.3859123014261292 88.74132923190237 41.0 147.661435001052 18.181818181818183 34291055.0 7-VF36-30-min-34C_2 1.4098811321338853 88.1473775581947 40.0 147.44209237656875 18.181818181818183 34291055.0 7-VF36-45-min-28C 74292403 74292403 2.90070146547751e-12 87.62323921599359 0.002412262 5567478.0 68724925.0 100.0 99.98626844627331 0.12234862387990966 68724925.0 93.46 32557690.0 7-VF36-45-min-28C_1 1.462480788281703 88.43186742620892 41.0 147.53385596629735 18.181818181818183 34836430.0 7-VF36-45-min-28C_2 1.5011197185450518 88.34000370947696 40.0 147.3271417593594 18.181818181818183 34836430.0 7-VF36-45-min-34C 69182438 69182438 2.90070146547982e-12 87.99924050089129 0.002201014 5096527.0 64085911.0 100.0 99.99232748677007 0.14798260416396358 64085911.0 93.95 30444686.0 7-VF36-45-min-34C_1 1.5640654642715635 88.2034241516082 41.0 147.40829611416277 18.181818181818183 32406015.0 7-VF36-45-min-34C_2 1.5906378156531373 88.44816934481297 40.0 147.21819779445266 18.181818181818183 32406015.0 7-VF36-75-min-28C 67226698 67226698 2.90070146547759e-12 87.81653086694813 0.002280461 4964793.0 62261905.0 100.0 99.98710768647378 0.11608703588494441 62261905.0 92.36 29525726.0 7-VF36-75-min-28C_1 1.5535911554908677 88.03517096200241 41.0 147.57852735283103 18.181818181818183 31967861.0 7-VF36-75-min-28C_2 1.4624717082481675 88.42205723343665 40.0 147.3834570602018 18.181818181818183 31967861.0 7-VF36-75-min-34C 78140075 78140075 2.90070146547618e-12 88.24788304848697 0.002481966 5595390.0 72544685.0 100.0 99.98724234587274 0.14888478735554506 72544685.0 93.78 34487332.0 7-VF36-75-min-34C_1 1.5205947293306235 88.3544420626974 41.0 147.43730050212918 18.181818181818183 36774202.0 7-VF36-75-min-34C_2 1.557998735867563 88.14801959517621 40.0 147.23195834405868 18.181818181818183 36774202.0 7-are-15-min-28C 74465971 74465971 2.90070146547589e-12 87.6835380283969 0.00215268 5620907.0 68845064.0 100.0 99.99330089953871 0.18341765213552566 68845064.0 93.69 32651607.0 7-are-15-min-28C_1 2.0086608766418097 88.68165040715806 42.0 147.09051854962584 18.181818181818183 34851862.0 7-are-15-min-28C_2 1.7885363021566218 88.4987350609019 41.0 146.90932266402294 18.181818181818183 34851862.0 7-are-15-min-34C 77918451 77918451 2.90070146547778e-12 88.01842069473378 0.002584164 5752114.0 72166337.0 100.0 99.98925122110603 0.2324587986224103 72166337.0 93.74 34298720.0 7-are-15-min-34C_1 1.527898257845457 87.86019941306218 41.0 147.50953515601984 18.181818181818183 36591116.0 7-are-15-min-34C_2 1.506756403243921 87.30715267305676 40.0 147.30800585584763 18.181818181818183 36591116.0 7-are-30-min-28C 65280715 65280715 2.90070146547729e-12 87.98997682546829 0.002056042 4821076.0 60459639.0 100.0 99.99433837175243 0.19005571634326165 60459639.0 93.9 28723510.0 7-are-30-min-28C_1 2.134481576563622 88.40065849624035 42.0 146.98643931701346 18.181818181818183 30589241.0 7-are-30-min-28C_2 1.8502642859386125 88.2879803617928 40.0 146.8105984715345 18.181818181818183 30589241.0 7-are-30-min-34C 80736603 80736603 2.90070146547965e-12 87.7468401785495 0.002198254 6106770.0 74629833.0 100.0 99.99285674403157 0.24256653502092118 74629833.0 93.7 35427021.0 7-are-30-min-34C_1 1.9531026779779515 88.89633752648896 42.0 147.0847184303038 18.181818181818183 37808845.0 7-are-30-min-34C_2 1.79059861210464 88.59929417703096 40.0 146.90379518337573 18.181818181818183 37808845.0 7-are-45-min-28C 81601475 81601475 2.90070146547934e-12 87.31309820073719 0.002403581 6394582.0 75206893.0 100.0 99.98554254860656 0.2784611777540125 75206893.0 93.4 35634762.0 7-are-45-min-28C_1 2.0816430471166836 87.78282245509303 41.0 147.1529108082968 18.181818181818183 38154883.0 7-are-45-min-28C_2 1.8033242688539033 87.77921337581797 40.0 146.96286045484663 18.181818181818183 38154883.0 7-are-45-min-34C 75662498 75662498 2.90070146547672e-12 87.314783077873 0.002394594 5963233.0 69699265.0 100.0 99.98261531165357 0.3377940929506215 69699265.0 93.53 33043797.0 7-are-45-min-34C_1 1.380086527751493 87.63914106443968 41.0 147.61175359609172 18.181818181818183 35330787.0 7-are-45-min-34C_2 1.4008035311608182 87.79554109728232 40.0 147.4361344965228 18.181818181818183 35330787.0 7-are-75-min-28C 77338599 77338599 2.90070146547557e-12 87.73396063199955 0.002332655 5856194.0 71482405.0 100.0 99.9912943611788 0.24275624190316483 71482405.0 93.86 33932032.0 7-are-75-min-28C_1 1.6575779731856815 88.34954514021526 41.0 147.45477423540603 18.181818181818183 36151705.0 7-are-75-min-28C_2 1.549628232906669 88.03695653732177 40.0 147.2696049882018 18.181818181818183 36151705.0 7-are-75-min-34C 75387107 75387107 2.90070146547703e-12 87.24926398886748 0.002516076 5933209.0 69453898.0 100.0 99.98186998806028 0.2933427868944087 69453898.0 93.41 32899292.0 7-are-75-min-34C_1 1.3689635671667213 87.52444749691172 41.0 147.66311678348404 18.181818181818183 35220220.0 7-are-75-min-34C_2 1.3901022201839763 87.40991188025099 40.0 147.46811783117766 18.181818181818183 35220220.0 8-OE3-15-min-28C 66768653 66768653 2.90070146547467e-12 87.6379279360331 0.002170224 5043691.0 61724962.0 100.0 99.99175374137937 0.15593691252495223 61724962.0 90.65 29262193.0 8-OE3-15-min-28C_1 2.13139290578572 88.95367451659563 42.0 146.9001519848361 18.181818181818183 32280852.0 8-OE3-15-min-28C_2 1.9269558565158933 88.94605847091177 41.0 146.71822840983256 18.181818181818183 32280852.0 8-OE3-15-min-34C 75843266 75843266 2.9007014654758e-12 87.55921191474006 0.002515893 5760511.0 70082755.0 100.0 99.97851825317085 0.24210948898912435 70082755.0 93.2 33218259.0 8-OE3-15-min-34C_1 1.4748739831385407 87.13588672574699 41.0 147.53445595882545 18.181818181818183 35641034.0 8-OE3-15-min-34C_2 1.4375547903200427 87.36041443863866 40.0 147.3727485010676 18.181818181818183 35641034.0 8-OE3-30-min-28C 67130063 67130063 2.90070146547727e-12 87.78533397175569 0.002006127 4981810.0 62148253.0 100.0 99.99280913012953 0.11939675922990145 62148253.0 93.88 29469442.0 8-OE3-30-min-28C_1 2.0317574237401095 89.02324127762269 41.0 147.0631436963443 18.181818181818183 31389024.0 8-OE3-30-min-28C_2 1.8018896041605585 89.28500936812618 40.0 146.89151618731438 18.181818181818183 31389024.0 8-OE3-30-min-34C 82139743 82139743 2.90070146547685e-12 87.98163880303352 0.002342895 5940568.0 76199175.0 100.0 99.99020855540759 0.1097164109716411 76199175.0 93.75 36141066.0 8-OE3-30-min-34C_1 1.5922299269919098 89.26336110433655 41.0 147.40011765443467 18.181818181818183 38551883.0 8-OE3-30-min-34C_2 1.5820919710830508 88.92732183475843 40.0 147.20565550585428 18.181818181818183 38551883.0 8-OE3-45-min-28C 85613790 85613790 2.9007014654758e-12 87.8964194903648 0.002247575 6250503.0 79363287.0 100.0 99.98911461416662 0.11659295311193449 79363287.0 93.73 37633986.0 8-OE3-45-min-28C_1 2.337959712170121 89.33427687509624 41.0 147.14092647438252 18.181818181818183 40153080.0 8-OE3-45-min-28C_2 1.8212011631785165 89.67695180637116 40.0 146.95400878338597 18.181818181818183 40153080.0 8-OE3-45-min-34C 78604019 78604019 2.90070146547846e-12 87.35285660139083 0.002194792 6054501.0 72549518.0 100.0 99.97680480799335 0.1774043488476381 72549518.0 93.22 34347450.0 8-OE3-45-min-34C_1 1.3866348787821203 88.2593996431907 41.0 147.70311499413305 18.181818181818183 36847132.0 8-OE3-45-min-34C_2 1.3072939299292483 89.13670428228572 40.0 147.5559599591089 18.181818181818183 36847132.0 8-OE3-75-min-28C 82028780 82028780 2.90070146547645e-12 87.686380316762 0.00238175 6088366.0 75940414.0 100.0 99.98618917194736 0.14036267961351911 75940414.0 93.52 35974036.0 8-OE3-75-min-28C_1 1.3847419479050223 89.13839900410628 41.0 147.77949922165243 18.181818181818183 38468676.0 8-OE3-75-min-28C_2 1.306093916621018 89.4530129747029 40.0 147.5883780871481 18.181818181818183 38468676.0 8-OE3-75-min-34C 71832411 71832411 2.90070146547575e-12 88.13011719737487 0.002193569 5146005.0 66686406.0 100.0 99.99030986915083 0.11069122543506094 66686406.0 93.71 31659207.0 8-OE3-75-min-34C_1 1.6676944258959117 89.02772412994125 41.0 147.45987919883183 18.181818181818183 33785766.0 8-OE3-75-min-34C_2 1.5263197264993433 89.44939343109189 40.0 147.2795046884537 18.181818181818183 33785766.0 8-VF36-15-min-28C 77942788 77942788 2.90070146547807e-12 88.0207005168971 0.002746146 5590855.0 72351933.0 100.0 99.98766999079348 0.09653508497139945 72351933.0 93.48 34311396.0 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